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HudsonAlpha Institute for Biotechnology

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Repositories

Showing 10 of 37 repositories
  • Burden-Analysis Public
    HudsonAlpha/Burden-Analysis’s past year of commit activity
    Shell 0 0 0 0 Updated Feb 4, 2026
  • Run-Tractor Public

    A pipeline used to prepare files for Tractor-Mix. Performs phasing with shapeit5 and local ancestry with rfmix2.

    HudsonAlpha/Run-Tractor’s past year of commit activity
    Shell 0 0 0 0 Updated Jan 31, 2026
  • biotrain-bootcamp-website Public

    This repository was previously hosted at james-lawlor.github.io and was the biotrain bootcamp website where we posted slides and an overview of the computational biology workshop. It will probably need some tweaking to properly make it a functioning .github.io site again.

    HudsonAlpha/biotrain-bootcamp-website’s past year of commit activity
    0 0 0 0 Updated Jan 26, 2026
  • vep-configs Public
    HudsonAlpha/vep-configs’s past year of commit activity
    Shell 0 0 0 0 Updated Oct 1, 2025
  • talos Public Forked from populationgenomics/talos

    Fork for HudsonAlpha deployment of populationgenomics/talos

    HudsonAlpha/talos’s past year of commit activity
    Python 2 MIT 12 0 0 Updated Sep 22, 2025
  • iTF-Microglia Public

    All code generated for Rodriguez-Nunez et al. 2025

    HudsonAlpha/iTF-Microglia’s past year of commit activity
    R 0 MIT 0 0 0 Updated Sep 11, 2025
  • ClinvArbitration Public Forked from populationgenomics/ClinvArbitration

    A side-project from the AIP, containing the code, logic, and documentation for the ClinVar consequence reassessment process in use at the CPG

    HudsonAlpha/ClinvArbitration’s past year of commit activity
    Python 0 MIT 3 0 0 Updated Sep 3, 2025
  • Pre-Imputation-QC-Pipeline Public
    HudsonAlpha/Pre-Imputation-QC-Pipeline’s past year of commit activity
    Shell 0 1 0 0 Updated Apr 17, 2025
  • CSL_public_benchmark Public

    Location of public benchmarking; primarily final results

    HudsonAlpha/CSL_public_benchmark’s past year of commit activity
    Shell 18 Apache-2.0 0 0 0 Updated Feb 17, 2025
  • Generate-PRS Public
    HudsonAlpha/Generate-PRS’s past year of commit activity
    Shell 0 0 0 0 Updated Oct 30, 2024
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