fix(phecodex): correct sex-specific flags for two GU phenotypes#7
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ilarsf wants to merge 1 commit intoPheWAS:mainfrom
Open
fix(phecodex): correct sex-specific flags for two GU phenotypes#7ilarsf wants to merge 1 commit intoPheWAS:mainfrom
ilarsf wants to merge 1 commit intoPheWAS:mainfrom
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@adlewismbb Do you want to make version changes alongside content changes like this? |
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Corrects the sex restrictions in
phecodeX_R_sex.csvso that:• GU_603.6 – Scrotal pain → male-only
• GU_614.55 – Candidiasis of vulva and vagina → female-only
The previous values allowed both sexes, leading to inaccurate cohort definitions when generating sex-stratified PheWAS inputs. These fixes ensure downstream phenotype assignments (e.g.,
phewas_table()and any SNP-sex interaction models) now exclude biologically implausible cases.No other codes were modified. CSV schema unchanged.