MEDCNN: Multiresolution Encoder-Decoder Convolutional Neural Network

• This is a 2D version of MEDCNN and without attentions in the decoder
• Full paper with attentions: https://doi.org/10.1109/ICASSP49660.2025.10890832

Installation guide

Install TFDWT from PyPI (Option $1$)

pip install MEDCNN

Install TFDWT from Github (Option $2$)

Download the package

git clone https://github.com/kkt-ee/MEDCNN.git

Change directory to the downloaded MEDCNN

cd MEDCNN

Run the following command to install the TFDWT package

pip install .

Verify installation

import MEDCNN
MEDCNN.__version__

Dependency

pip install TFDWT==0.0.2

Important: Make sure TFDWT version 0.0.2 is installed. The newer version 0.0.3 is not compatible!!

Sample usage

• Import MEDCNN 2D Gφψ without attention

from MEDCNN.models.G2DwithoutAttention import Gφψ, configs

• Import the control Unet2D model for reference

from MEDCNN.models.ControlUnet2D import Unet2D, uconfigs

• Import utils to compile and train model

from MEDCNN.utils.utils import elapsedtime, timestamp
from MEDCNN.utils.BoundaryAwareDiceLoss import BoundaryAwareDiceLoss
from MEDCNN.utils.Load2Ddata import load_ibsr_XY
from MEDCNN.utils.TTViterators import get_train_test_val_iterators
from MEDCNN.utils.dice import dice_coef
from MEDCNN.utils.compile1 import compile_model
from MEDCNN.utils.Train1 import train

• Example: Compile a MEDCNN

CONFIGKEY= 'minimal2'
model, segconfig = Gφψ(config=configs[CONFIGKEY], compile=False), 'nonResidual'
model, lossname = compile_model(model, dataset, dice_coef)

• Example: Compile a control Unet2D

CONFIGKEY = '45678',
model, segconfig = Unet2D(config=uconfigs['45678'], compile=False), 'nonResidual'
model, lossname = compile_model(model, dataset, dice_coef)

• Example: Train a model with X an Y of shape (7056, 256, 256, 1), (7056, 256, 256, 1)

train_iterator, test_iterator, val_iterator = get_train_test_val_iterators(X,Y) #Assuming X and Y is loaded by a dataloader
train(
 model, 
 train_iterator, test_iterator, val_iterator, 
 dataset='IBSR', 
 segconfig=segconfig, 
 lossname='bce', 
 CONFIGKEY=CONFIGKEY, 
 epochs=40)

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Uninstall MEDCNN

pip uninstall MEDCNN

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MEDCNN (C) 2025 Kishore Kumar Tarafdar, भारत 🇮🇳