Repositories list

• Autometa

  Public
  Autometa: Automated Extraction of Genomes from Shotgun Metagenomes

  metagenomicsbinningtaxon-profiling

  Python

  •

  Other

  •16•44•39•1•Updated Jan 24, 2025Jan 24, 2025

• KwanLab.github.io

  Public
  HTML

  •1•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• autometa_test_data

  Public
  MInimal datasets for testing the autometa workflow

  0•0•0•0•Updated Oct 9, 2024Oct 9, 2024

• bioconda-recipes

  Public
  Conda recipes for the bioconda channel.

  Shell

  •

  MIT License

  •3.7k•0•0•0•Updated Aug 24, 2023Aug 24, 2023

• metaBenchmarks

  Public
  Repository containing metagenomics benchmarking modules

  Shell

  •

  MIT License

  •3•1•6•0•Updated May 1, 2023May 1, 2023

• cvmfs-singularity-sync

  Public
  Scripts to synchronize Singularity images to a CVMFS repository.

  Python

  •

  Apache License 2.0

  •155•0•0•0•Updated May 17, 2022May 17, 2022

• JSCB

  Public
  Fortran

  •1•0•0•0•Updated Jun 21, 2019Jun 21, 2019

• ClusterFinder

  Public
  Predicting biosynthetic gene clusters in genomes

  Python

  •20•0•0•0•Updated Oct 1, 2015Oct 1, 2015