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1. vesselNN_dataset vesselNN_dataset Public archive

   Open-source volumetric brain vasculature dataset — 12 two-photon microscopy stacks with dense voxel-level segmentation labels

   16 7

2. vesselNN vesselNN Public archive

   Volumetric vessel segmentation with convolutional networks (Teikari et al., 2016, arXiv:1606.02382). ZNN framework, 3D architecture

   C++ 14 5

3. twoPhotonVessels twoPhotonVessels Public archive

   MATLAB analysis pipeline for two-photon microscopy vasculature — vessel tracing, diameter measurement, and 3D visualization

   MATLAB 11 11

4. KiMoRe_wrapper KiMoRe_wrapper Public archive

   MATLAB/R wrangling for the KiMoRe kinematic rehabilitation dataset (Capecci et al., 2019, IEEE TNSRE). Kinect motion capture for stroke and Parkinson's

   MATLAB 11 1

5. mixedImageSeparation mixedImageSeparation Public archive

   FastICA blind source separation for microscopy images with BM3D denoising and ICASSO robustness analysis

   MATLAB 7 2

6. minivess_mlops minivess_mlops Public

   MLOps pipeline for rodent cerebrovasculature segmentation. Dataset: Poon, Teikari et al. (2023), Scientific Data 10, 141

   Python 3